A literature review and reflection on clinical trials: current challenges, future directions, and potential strategies t...
A literature review and reflection on clinical trials: current challenges, future directions, and potential strategies to overcome practical barriers
Review Article
A literature review and reflection on clinical trials: current challenges, future directions, and potential strategies to overcome practical barriers
Kaiping Zhang1,2, Savvas Lampridis3,4, Charles B. Simone II3,5,6, Ionut Negoi3,7,8, Yan Peng2,3, Binghan Shang2,3, Yao Lin2,3, Yaling Cheng2,3, Fanghui Yang2,3, Vishal G. Shelat3,9, Kamyar Kalantar-Zadeh3,10
1Editor-in-Chief, AME Clinical Trials Review;2Editorial Office, AME Publishing Company, Hong Kong, China;
3Editorial Team, AME Clinical Trials Review;4Department of Cardiothoracic Surgery, Hammersmith Hospital, Imperial College Healthcare NHS Trust, London, UK;
5Department of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA;
6New York Proton Center, New York, NY, USA;
7Carol Davila University of Medicine and Pharmacy Bucharest, Bucharest, Romania;
8Department of General Surgery, Emergency Hospital of Bucharest, Bucharest, Romania;
9Department of General Surgery, Tan Tock Seng Hospital, Singapore, Singapore;
10The Landquist Institute at Harbor-UCLA, Torrance, CA, USA
Contributions: (I) Conception and design: K Zhang; (II) Administrative support: None; (III) Provision of study materials or patients: None; (IV) Collection and assembly of data: K Zhang, Y Peng, B Shang, Y Lin, Y Cheng, F Yang; (V) Data analysis and interpretation: K Zhang; (VI) Manuscript writing: All authors; (VII) Final approval of manuscript: All authors.
Correspondence to: Kaiping Zhang, PhD, MPH. Editorial Office, AME Publishing Company, Hong Kong, Flat/RM C 16F, Kings Wing Plaza 1, No. 3 on Kwan Street, Shatin, NT, Hong Kong, China. Email: zhangkp@amegroups.com.
Background and Objective: Clinical trials are crucial for evidence-based medicine; however, substantial challenges remain. This review aims to provide an overview of recurring challenges in clinical trials and offer potential strategies to overcome practical barriers for stakeholders.
Methods: A search of PubMed for English-language papers, published from January 1, 2021 to July 31, 2025 was conducted, focusing on reflections on trial registration, protocols, statistical analysis plans (SAP), sample size, risk of bias, transparency, reporting, peer review, dissemination, and emerging areas such as artificial intelligence (AI).
Key Content and Findings: The clinical trial landscape has expanded dramatically, surpassing one million trials in total. However, it is marked by significant redundancy, waste, and lack of reproducibility. Transparency remains hampered by inadequate prospective registration, unreported results, limited protocol and SAP availability, substandard registration quality, and a lack of core requirements on registration platforms, despite improvements under a series of policy initiatives. Regarding quality and integrity, many trials have a high risk of bias, design flaws, underpowered sample sizes, or uncertain findings. Data fabrication and retractions due to dishonesty contribute to the complexity of this landscape, along with a peer-review workflow that underutilizes appraisal in the pre-submission, preprint, and post-publication stages. Regarding reporting and dissemination, challenges include poor adherence to the CONSORT and SPIRIT guidelines, ambiguous adoption of reporting guidelines by journals, heavy burdens on researchers using reporting guidelines, severe spin reporting of results, and inaccurate public dissemination. In emerging areas, AI is rapidly developing in almost every aspect of clinical trials, including its use in assisting with reviewing the risk of bias and integrity. The most problematic issues are the insufficient disclosure of AI use and inadequate human verification. This review proposes 18 suggestions and 19 strategies to address these concerns, such as requiring registration prior to ethical approval by ethical committees, founding journals dedicated to statistically negative trials, and developing an integrated trial quality feedback and fixing mechanism.
Conclusions: There are pressing challenges with uncontrolled trial expansion, insufficient transparency, poor quality, dishonest or wrong practices, biased reporting and dissemination, and insufficient disclosure and verification of AI. The proposed suggestions and strategies may contribute to a healthier clinical trial ecosystem if implemented.
Received: 05 January 2026; Accepted: 30 March 2026; Published online: 23 April 2026.
doi: 10.21037/actr-25-132
Introduction
Background
Clinical trials are at the top of the pyramid of evidence-based medicine and play a significant role in healthcare decision-making. In recent decades, there has been a remarkable increase in the number of registered and published clinical trials across countries, regions, and disciplines (1-6). However, only a small proportion of the tested regimens have been successfully applied in clinical practice. While there is undoubtedly an inherent chance in scientific investigations, increasing evidence indicates that there are multiple common problems in the design, implementation, analysis, and reporting of clinical trials. Among these problems, the following are particularly troubling: many clinical trials are unnecessary (7), a considerable amount of published clinical trials are of low quality (5,8-13), and serious publication bias (14,15) and result spinning (16-18) are prevalent, alongside worrisome retractions and integrity issues (19-21). For example, studies have found that 12.7% to 17.2% of randomized controlled trials (RCTs) included in meta-analyses were redundant (22). Even more strikingly, a substantial number of clinical trials were found to be unnecessarily duplicated, as high-grade Cochrane systematic review evidence already existed prior to their initiation (7). Admittedly, clinical trials undergo various time-consuming processes such as review, approval, and governance, and the resulting significant delays may partly explain such redundancy and duplication. However, this cannot fully account for the redundancy and duplication issues currently reported in clinical trials. Furthermore, published clinical trials that were of poor quality and contained avoidable design flaws have been reported across multiple specialties, with rates ranging from over 40% to nearly 80% (23-25). Strikingly, one study found that over 60% of retracted clinical research over a 10-year period were clinical trials, with data/data analysis errors (38.2%) being the most common reason and data fabrication accounting for over 90% within the cases (19). The VITALITY study further quantified the impact of clinical trial retractions on one aspect of the healthcare evidence ecosystem, revealing that the exclusion of retracted trials would alter the direction of effect in meta-analyses by 6.8% to 10.1% (20). Regrettably, these issues have emerged and persisted despite the existence of a series of policy initiatives governing clinical trials at multiple levels—including the World Health Organization (WHO), national and regional organizations, academic institutions, and journals (26-29). These concerns have led to renewed scrutiny of how RCTs are designed, conducted, and interpreted within evidence-based medicine, rather than a rejection of their foundational role (30). For clarification, in this review, trial redundancy refers to studies addressing questions already adequately answered by existing high-quality evidence, trial duplication denotes repeated testing of substantially similar interventions or hypotheses, research waste encompasses trials that are unnecessary, poorly designed, underpowered, or unusable, and low-quality trials specifically denote studies at high risk of bias due to methodological or reporting deficiencies.
Rationale and knowledge gap
Given these facts, some reviews have elaborated on how to conduct rigorous and reliable clinical trials and have outlined journal criteria for RCTs (31-34). There are also reviews that have reflected on some of the challenges mentioned and proposed recommendations for improvements (25,35,36). However, no comprehensive review has provided a broad picture of the current state of clinical trials, their landscape, registration, quality, peer review workflow, reporting, dissemination, and emerging trends. This review attempts to address this gap. In addition, it focuses on reflections from the evolving landscape of clinical trials and research over the last 5 years. Finally, this review goes beyond a mere literature review by offering critical insights and providing recommendations and practical strategies for addressing major concerns.
Objective
This review aims to review the current landscape of clinical trials, issues of transparency, quality, pre- and post-publication appraisal, reporting and dissemination, and emerging trends in clinical trials. In addition, we aim to propose solutions and attempt to offer practical strategies considering real-world challenges. Finally, we hope this review will function not only as a critique of current practice but also as a learning resource for clinicians, investigators, reviewers, and regulators.
In the following sections, we first outline key challenges across the trial life cycle, then discuss practical recommendations and potential implementation strategies, and finally integrate these into a unified framework for stakeholders. We present this article in accordance with the Narrative Review reporting checklist (available at https://actr.amegroups.com/article/view/10.21037/actr-25-132/rc).
Methods
In this review, we searched for relevant reviews, original articles, comments and perspectives that reflect on clinical trials. Using PubMed, we searched for articles published between January 1st, 2021, and July 31st, 2025, that reflected on trial quantity, quality, registration, protocol, risk of bias, barriers, reporting, dissemination, and up-to-date trends including artificial intelligence (AI). Only articles published in English were considered eligible for inclusion (Table 1). Although the primary search focused on 2021–2025 reflections, relevant studies published earlier were included to contextualize persistent systemic issues. A detailed search strategy can be found in Appendix 1. The literature screening process and corresponding inclusion details can be found in Figure S1.
Table 1
The search strategy summary
Items
Specification
Date of search
July 31, 2025
Databases searched
PubMed
Search terms used
‘clinical trial’, ‘registry’, ‘protocol’, ‘quantity’, ‘quality’, ‘risk of bias’, ‘barrier’, ‘transparency’, ‘reporting’, ‘completeness’, ‘peer review’, ‘social media’, ‘knowledge transformation’, ‘lay summary’, ‘artificial intelligence’, etc. See detailed search strategy with MeSH and free text search terms and filters in the Appendix 1
Timeframe
Studies published from January 1st, 2021, to July 31st, 2025. References of eligible articles published in this timeframe were further checked for inclusion, regardless of their publication timeframe
Inclusion and exclusion criteria
Include reviews, original articles, commentaries, perspectives that are published in English. Exclude retracted publications, original clinical trials, original clinical trials protocols, and meta-analysis that only focus on the trial itself while do not provide reflex on clinical trials
Selection process
K.Z. conducted the selection by round-1 screening on title and abstract and round-2 selection after reading the full article
We also retrieved data on registered clinical trials as of August 2025 from the International Clinical Trials Registry Platform, ClinicalTrials.gov, ChiCTR, ITMCTR, EU-CTR, JapicCTI, CTRI, and ISRCTN platforms, along with the number of published clinical trials in PubMed, Cochrane Library, Embase, Web of Science, and Scopus. Furthermore, we searched the EQUATOR website (https://www.equator-network.org/) for reporting guidelines listed as of July 19, 2025, and examined reporting guidelines related to clinical trials.
In addition, we reviewed all commentaries published in AME Clinical Trials Review between its inaugural issue in October 2023 and December 2025, extracting points where the commented clinical trial was mentioned as flawed and areas for further improvement, then compiling and quantifying the mention frequency. Specifically, the dimensions extracted include whether the commentary identifies deficiencies in clinical trials. If deficiencies are identified, it further examines whether the commentary addresses issues related to sample size, trial design, appropriateness of the control group, selection bias and population representativeness, trial bias, statistical analysis, outcome measures, follow-up, interpretation of results, the trial’s generalizability and clinical applicability, trial reporting, and other aspects beyond these dimensions. We also reviewed the interviews conducted with 12 experts who authored commentaries in the journal AME Clinical Trials Review. These interviews were carried out independently from our review and we did not participate in its expert selection or interview topic setting. This source of information serves as supplementary content from an expert perspective for our review.
Based on the above integrated information, we identified recurring challenges and specific aspects frequently discussed in clinical trials. Subsequently, we proposed targeted recommendations for each identified challenge. Following this, we conducted brainstorms and literature reviews to identify practical barriers. Finally, we proposed tailored potential implementation strategies for each identified barrier.
In this review, no AI or large language models were applied to the setting or refining of the search strategy, searching, choosing references, summarizing reference content, collecting data, analyzing data, outlining article, drafting articles, generating figures and tables, or generating references.
The landscape of clinical trials and regional variations
Situation overview and existing challenges
As of August 2025, preliminary searches across the International Clinical Trials Registry Platform, ClinicalTrials.gov, ChiCTR, ITMCTR, EU-CTR, JapicCTI, CTRI, and ISRCTN platforms revealed that the number of registered clinical trial records has now surpassed one million. And, as of August 2025, the number of published clinical trials and trial protocols across databases is consistently impressive among different databases—PubMed (960,000 and 30,000), Cochrane Library (1,000,000 and 120,000), Embase (520,000 and 110,000), Web of Science (300,000 and 200,000), and Scopus (1,000,000 and 210,000). Given the heterogeneity in data sources, definitions, and denominators, these registry counts and publication volumes should be interpreted as indicative trends rather than directly comparable or causally linked measures.
This high volume of clinical trials has been accompanied by marked variations in trial conduct and access across countries, characterized by deficiencies in equity, accessibility, and relevance to real-world needs at regional and national scales. Specifically, while clinical trials in oncology achieved an average annual absolute growth of 266.6 trials between 2000 and 2021, and low- and middle-income countries (LMICs) showed notable increases in early phase trials, the highest trial density remained in high-income countries (HICs). Moreover, 76.4% of countries had not initiated any new trials by 2024 (1). Among LMICs where trial volumes have grown significantly, it is hard to ignore the contributions from Asia. Between 2005 and 2018, the number of cancer clinical trials in four Asian countries (China, India, Japan, and South Korea) increased by more than twofold (37). Among Phase I tumor trials conducted in Australia, the proportion of Asian contributions surged from 6% to 39% over the decade from 2012 to 2022 (38). Moreover, while the United States remained the first contributor to the number of tumor clinical trials conducted globally (46.5% of all trials) during 2010–2019, with China ranking second (2), by 2023 China’s total number of trials had far exceeded that of the United States, which ranks first (3). The number of RCTs in surgery has also increased primarily in Asia, particularly in China; however, as of 2019, the countries publishing the most surgical RCTs remained developed nations such as Finland and the Netherlands (5). In contrast, Pakistan conducted only 2,273 trials between 2000 and 2022 (39). Despite the emergence of two major epidemics in Africa between 2010 and 2018, Nigeria’s prevalent measles and South Africa’s prevalent tuberculosis, neither disease was among the top ten clinical trials in those countries (40). Further evidence supports this observation. From 1997 to 2019, the number of RCT articles in MEDLINE increased from 10,360 to 22,384 in the top 10 countries in the Nature Index 2019 rankings. However, this substantial increase in RCTs was almost exclusively published in non-PubMed core clinical journals, meaning these trials appeared predominantly in journals with limited relevance to clinical practice (41).
The expansion of clinical trials has been accompanied by trial redundancy, waste, and quality concerns, with similarly significant regional variations. For instance, among the bariatric surgery RCTs registered on ClinicalTrials.gov from 2000 to 2022, 83.6% were found to be research waste, and 43.8% of these were published (42). One study found that during the decade from 2010 to 2021, only two out of the 10 Association of Southeast Asian Nations member nations had over 50% of their trials meeting high quality standards (43). Approximately 50% of trials conducted in China, India, Japan, and South Korea from Asia, between 2005 and 2018, had a small sample size of only one to 50 participants that can hardly guarantee sufficient power (37). Trials led by LMICs demonstrated larger median effect sizes than those in HICs (44). In contrast, a study that analyzed two decades of surgical RCTs found that the 10 countries generating surgical RCTs with the best methodological standards were all in Europe, where trials exhibited the highest proportion of low risk of bias (30.5%), with the United Kingdom ranking first (5). In addition, likely due to the high quality of United Kingdom clinical trials, the citation rate of trials originating from United Kingdom institutions is higher than that of other countries, including the United States (45).
Consequently, more newly approved drugs and bioagents are based on fewer critical trials or less rigorously designed trials (46). It is estimated that 80% of key clinical trials that were the rationale for approving novel cancer treatments from 2017 to 2021 in China had flaws in their design, conduct, or reporting (47). Among RCTs of drugs in oncology that led to FDA approval between 2009 and 2021, 55% included comparisons within trials that used a design favoring the test group, raising concerns over whether the test group truly demonstrated superiority (48). In key trials underpinning European Medicines Agency approvals for new oncology drugs from 2014 to 2016, 49% of primary outcomes exhibited high risk of bias (49).
In short, the global growth of clinical trials has not translated into global equity, and redundancy is common.
Key recommendations on the challenges
To address the above-mentioned clinical trial landscape and regional variations, we propose two key recommendations. For clarification, the following recommendations are presented as normative proposals informed by the accumulated evidence reviewed above, rather than as direct empirical conclusions derived from any single dataset.
Managing the uncontrolled expansion of clinical trials, minimizing redundant trials and redirecting efforts toward quality assurance and critical trials that match local needs.
Trials initiated by HICs should consider the inclusion of both developed and developing regions in multicenter trials to fully reflect the global burden of disease, population diversity, and accessibility of trial results in resource-constrained settings. Trials of dose reduction, efficiency, and practicality in developing regions should be prioritized (50).
Barriers and potential practical strategies
LMICs face various obstacles in conducting clinical trials. For instance, it has been reported that Pakistan suffers from funding deficits, weak infrastructure, shortages of technical personnel, absence of regulatory bodies such as local registries, low literacy rates hindering informed consent processes, and cultural and religious barriers (39). However, 49 trial sites across 21 LMICs in sub-Saharan Africa, South Asia, Latin America and the Caribbean, the Middle East and North Africa, and East Asia and the Pacific have established infrastructure, research personnel, ethics and recruitment, and data management services, but they lack trial network development (51). Although regional variations do exist, a survey of clinicians with clinical trial experience in LMICs identified shared factors affecting trial implementation, including difficulties in obtaining trial funding (78%), lack of dedicated research time (55%), and insufficient training (91% of trainees and early career researchers rated this as moderate or significant impact) (50). Regarding funding, research indicates that RCTs in HICs are more likely to receive industrial funding than those in LMICs (73% vs. 21%) (44). Correspondingly, the most frequently mentioned strategies for addressing these obstacles were building capacity and human resources (46%), fostering national political will (29%), and strengthening funding opportunities or infrastructure (21%) (50).
Thus, the following practical strategies may be considered to address these practical barriers (political will, funding, human resources, training, research time, and supervision).
Recognizing the importance of initiating clinical trials in LMICs and joining trials initiated by HICs to address the overall health burden in LMICs.
Providing policy support, including initiating trial opportunities and grants to address gaps in local clinical needs through proactive efforts by the governments and local institutions. Such efforts can supplement commercially sponsored trials, avoiding excessive reliance on pharmaceutical companies. Additionally, fostering a friendly policy environment for conducting trials initiated by HICs is necessary. Enhance funding diversity through multiple sources, including government grants, international charity funding, and actively identifying funding gaps through collaboration with commercial companies.
Offering more multifaceted pathways for nurturing and developing human resources within the healthcare system, including the establishment of specialized qualification standards for clinical trial professionals.
Enriching more flexible training, such as developing customized courses for specific regions, has proven highly effective (52), and making greater use of freely available online training resources.
Building upon point 3, a collaborative network and mechanism between trial professionals and clinicians should be established to address time shortages.
Building institutions to monitor clinical trial implementation, with a focus on reviewing trial rationale and necessity prior to implementation.
Transparency in clinical trials
Situation overview and existing challenges
To enhance the transparency of clinical trials, many international and regional regulations have been implemented over the past two decades. These include prospective registration, publication of trial protocols on registration platforms, statistical analysis plans (SAP) provided on registration platforms, submission of ethical approval documentation, and publication of trial results on publicly accessible registration platforms (27,29,53,54). For example, in 2017, the WHO established 11 best practices for clinical trials, including prospective registration, keeping registration records updated, providing trial results on the registration platform within 12 months, providing the protocol on the registration platform within 12 months, publishing trial results in journals, including trial identification numbers in published studies, publishing trial results in an open-access manner, examining the principal investigator’s past reporting records, monitoring trial registration records, monitoring trial result reporting, and ensuring public disclosure of trial results (29). The European Union Commission Guideline 2012/C 302/03 and Regulation (EU) No. 536/2014 require sponsors to disclose registered trial results to the European Medicines Agency via the EUCTR platform within 12 months of the trial’s completion. For pediatric clinical trials, this deadline is shortened to 6 months, and trial results must be accompanied by a public-facing summary of the trial findings (53). The U.S. Food and Drug Administration and the United Kingdom Medicines and Healthcare Products Regulatory Agency have similar regulations. Moreover, most trial registration platforms—particularly those designated as primary registries within the WHO network—explicitly require registrants to provide proof of ethical approval prior to trial registration (29). Furthermore, evidence has demonstrated the value of prospective registration for clinical trials (55,56) and the effectiveness of policy mandates in encouraging registration (57). For example, the 2007 FDA Amended Act mandated clinical trial registration and results reporting on ClinicalTrials.gov. A comparison of trial registrations before and after the act’s release between 2005 and 2014 revealed that trials were more likely to be registered following the act’s implementation (57).
Although these policies have improved clinical trial registration, it remains suboptimal. Key issues include continued unsatisfactory registration rates, severe deficiencies in prospective registration, and high rates of non-disclosure of results after the registration. For example, clinical trial registration rates were found to be 69% for nutrition-related trials (58), 33.7% for orthopedic trials (59), and 31% for multidisciplinary trials (55). Additionally, prospective registration has been demonstrated by multiple studies to be effective in reducing trial bias risks (55,56), while retrospective registration has been found to exhibit over six times the incidence of publication bias (60). However, a study analyzing 1,177 clinical trials revealed that only 36.7% of the registered trials were prospectively registered (55). Furthermore, the disclosure rate of trial results is poor. The disclosure or publication rate of reported trials across various disciplines ranges from 18.4% to 78% (61-67), with trials with a significant primary outcome showing a higher disclosure rate (68). Taking pediatrics—where clinical trials are inherently challenging—as an example, research found that between 2007 and 2016, 16.54% of 1,088 RCTs involving children were not completed after registration, with many failing to explain why the trials were abandoned (66). Among the 908 completed trials, 44.49% had no data disclosure available. The consequences of this are significant. In pediatrics, due to the unique nature of pediatric treatment regimens and challenges in recruiting trial participants, many drugs used for pediatric treatment are not specifically approved for children and are instead administered off-label (69). The non-disclosure of completed trial results, whether in peer-reviewed journals or trial registries, may lead to an incomplete risk perception of drugs, potentially triggering adverse events that could have been mitigated or avoided. Although some of these data originate from a single journal (59), involve small sample sizes (64), or are derived solely from one platform (65) and thus may not represent an entire discipline or all trial platforms, the aggregated findings from multiple studies collectively reveal an unsatisfactory picture.
The availability of clinical trial protocols and SAPs has also improved, although it remains suboptimal. Key features include continuing relatively low accessibility rates, weak willingness among trial correspondents to provide protocols and SAPs, and significant risks associated with protocols being published only in journals without disclosing the original protocol/amended protocol, and revision timelines on registration platforms. Clinical trial protocols are primarily disclosed in three ways, in order of release timing are: as files on trial registration platforms, as standalone peer-reviewed publications, and as supplementary materials to an official trial publication. One study analyzed the availability of protocols from 347 RCTs across the three methods and found that protocol accessibility increased from 36% in 2012 to 66% in 2016 (70). However, another systematic review analyzed 600 randomly selected RCTs on stroke and transient ischemic stroke from the Cochrane Database between 2008 and 2020, finding that only 5% had a protocol and only 1% had a SAP (71). Similarly, a random sample of 400 RCTs in the field of nutritional interventions revealed protocol and SAP availability rates of only 14% and 3%, respectively (58). Furthermore, after identifying 201 trials where 48% lacked publicly available protocols or SAPs, researchers sent up to four emails to trial correspondents; however, 76% did not respond, 7% declined to share protocols or SAPs, and 8% of emails were invalid (72). Moreover, among the three accessible ways to obtain trial protocols and SAPs, publishing protocols (whether as supplements to trial publications or as standalone journal articles) offered no significant additional benefits compared to directly disclosing original protocols on trial registration platforms from the beginning. Specifically, this study analyzed 589 RCTs published in journals with the highest impact factors in internal medicine. It was found that trials that publicly disclosed their protocols upon publication exhibited discrepancies of up to 33.1% between the protocols and the primary outcomes or sample sizes of the trials themselves (73). Although this study retrieved only RCTs published within a relatively short timeframe, another analysis of 4,754 trial protocols spanning a decade also identified similar findings (74). Another study analyzed clinical trials related to acupuncture anesthesia registered with the ICTRP from 2001 to 2023 in 21 countries. The findings revealed poor consistency between registered protocols and published articles, including 39% inconsistency in sample size, 36.6% inconsistency in blinding methods, and 24.4% inconsistency in secondary outcomes (75).
Furthermore, both the quality of clinical trial registrations and registration platforms have been found to have a considerable potential for improvement. Key manifestations include substantial variations between platforms, even though a set of core items are established by WHO (https://www.who.int/tools/clinical-trials-registry-platform/network/who-data-set/archived/1-3), resulting in significant gaps in critical data and difficulties in the retrieval of information. A study analyzing trials registered on ChiCTR found that the platform addresses numerous key dimensions such as study type, registration date, institution type, location, sample size, interventions, study design, funding sources, application of randomization and blinding, and number of research centers. However, it also overlooks critical areas including trial update progress, data management, ethical disclosures, and assessment of registration content quality (76). Additionally, researchers have identified significant discrepancies between registrations on the International Clinical Trials Registry Platform and ClinicalTrials.gov across multiple aspects, including institutional review board approval, study phase, location, design-related issues, and data-sharing plans (77). In addition, researchers retrieved trials from ClinicalTrials.gov and Clinical Trials Registry-India to identify studies conducted in India. However, the current registration platform interfaces are very challenging, making it difficult to ensure data accuracy, completeness, and transparency of the data. Authors had to piece together information from multiple sections, such as locations, baseline measurements, brief summaries, detailed descriptions, sponsors, inclusion/exclusion criteria, design groups, and other fields, to attempt to make an informed judgment (78).
Key recommendations on the challenges
Prioritizing strengthened oversight of mandatory registration for trials funded by non-pharmaceutical sponsors.This is because, unlike trials funded by pharmaceutical companies, much of the funding from non-pharmaceutical sponsors comes from the public, including tax revenues, and thus needs to maximize service to the public. However, a mandatory requirement imposed by the sponsors is likely to be the most direct and effective approach, as trial implementation inevitably involves funding issues. Furthermore, research indicates that the recent improvements in protocol accessibility have been primarily driven by industry-sponsored trials (70). However, numerous non-pharmaceutical sponsor institutions (such as universities and government funding agencies) have not similarly adequately implemented the WHO’s best practices for clinical trials. For example, policies and monitoring practices within the 21 major non-pharmaceutical European research funding agencies were found to fail to meet the WHO’s best practices for clinical trial transparency: 66.7% require prospective registration, 28.6% require trial results to be published on trial registries 12 months after trial completion, 42.9% actively monitor whether trials are registered, and 38.1% monitor whether results are disclosed (28). Research also evaluated open documents from 25 major medical research funding agencies in Europe, Oceania, South Asia, and Canada. The results revealed that these 25 non-pharmaceutical institutions implemented an average of only 49% (5/11) of the WHO’s best practices. Only 24% (6/25) of funders considered the principal investigator’s prior reporting record. The United Kingdom’s National Institute for Health and Care Research was the only funder that adopted all 11 policies, whereas some institutions did not obtain any points across all 11 policies (79) (Figure 1). Additionally, it is worth noting a paradox: while our review, approval, and governance of clinical trials aim to ensure ethical compliance, reliability, and translational potential, these lengthy processes may conversely cause significant delays that could lead to trial redundancy and duplication. Trial registration, particularly enhanced oversight of such registrations, becomes increasingly vital. This enables global trials to be publicly accessible and traceable at an earlier stage, significantly reducing current redundancy and duplication.
Figure 1 Adoption level of WHO’s 11 best practice criteria among the world’s largest 25 public or charity healthcare research funders. ‘YES’ indicates mandatory policies. ‘NO’ indicates complete absence of policies. ‘NO*’ indicates non-bounded policies (encourage but do not mandate). ‘NO#’ indicates incomplete policies (policies only apply to certain trial types). This figure is reused under the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0). Original source: O’Riordan M, Haslberger M, Cruz C, et al. Are European clinical trial funders policies on clinical trial registration and reporting improving? A cross-sectional study. J Clin Transl Sci 2023;7:e166. WHO, World Health Organization.
For industry-sponsored trials, a prioritized ranking of sponsors should be considered to encourage better registration. The AllTrials.net initiative publicly ranks sponsors based on their performance in trial reporting, encouraging better registration of industry-sponsored trials by enabling sponsors to avoid reputation damage (80).
Making it mandatory for trials to disclose their original protocols and SAPs upon registration on the platform, rather than waiting until subsequent publications.
Optimizing the registration platform, including establishing minimum standards for core registration information led by the WHO and implementing user-friendly structural adjustments to the platform. For example, clearly defining essential information as drop-down options while reserving manual entry fields for unusual fields to accommodate design variations; apply adaptive tuning to mandatory fields for each stage based on trial progress logic: once trial registration status changes to ‘Initiated’, the Ethics Number field becomes a mandatory entry. When the trial period reaches one year after initiation, the system automatically sends an email to the registered email address reminding to update the trial status and supplement trial outcome data. Upon changing the trial status from ‘In Progress’ to ‘Completed’ in the drop-down menu, the ‘Trial Outcome’ section automatically becomes a mandatory field.
Barriers and potential practical strategies
There are many practical barriers to more transparent clinical trials, and two key obstacles are listed here. First, there is a lack of execution and a reward-and-punishment framework for policy compliance. For instance, a study evaluating the outcomes of 1,093 rheumatology RCTs found that among journals claiming to support the recommendations of the International Committee of Medical Journal Editors (such as requiring prospective registration of clinical trials), 16% of trials published in 2022 lacked prospective registration (81). Due to the persisting lack of transparency in clinical trials, some scholars argue that complete trial transparency is an unachievable goal unless regulatory institutions, journal editors, and trial sponsors can further expand requirements and actually implement them (82). Second, there are knowledge gaps and time constraints. After interviewing authors of 1,093 RCTs, the reasons given for retrospective registration included: being unaware of the need for prospective registration; believing that only drug-related or industry-sponsored trials required prospective registration; being unaware that their study met the definition of a clinical trial; and knowing registration was required but facing time constraints (81).
In response to these obstacles, four practical strategies are recommended below, and an integrated scheme is visualized in Figure 2.
A feasible structural reform would be to require public trial registration before ethics review, thereby ensuring transparency from the outset. Specifically, ethics committees could require a registry identifier and public protocol summary as part of the submission. Thus, trial initiators should first complete registration before applying ethical certification/trial approval. Additionally, ethics review/trial approval processes should verify whether the trial has been registered and whether the original protocol and SAP are attached to the registration platform. Although the WHO’s current 11 best practices require ethical approval to be obtained prior to registration—meaning ethics precedes registration—there is a major practical flaw. This is because ethical approval and trial approval from local regulatory agencies carry greater practical compulsion; if a trial lacks ethical approval or local regulatory approval, it cannot proceed. Moreover, once a trial receives ethical approval, subsequent registration is not as strictly enforceable in practice. This recommendation is supported by evidence. Israel implemented a prerequisite requirement in 2016 mandating local registration on platforms prior to ethics review, with ethics committees directly verifying trial registration status during review. Consequently, trial registrations significantly increased from 2016 to 2021 (83). In India, despite legal mandates requiring approved trials to register, audits revealed that 12% of 381 approved trials had no registration records at all (84). Furthermore, another study randomly sampled registration records for 188 COVID-19-related RCTs and found that only 41% fully disclosed ethics information. This issue was not isolated to a single registration platform; both ChiCTR and ClinicalTrials.gov exhibited particularly pronounced deficiencies. This persists despite current WHO best practice requirements mandating ethics approval prior to registration (27).
Establishing rewards and penalties for compliance, strengthening monitoring, and conducting public audits. This can be achieved by incorporating trial registration, ethical approval, and the recording of ethical approval numbers on registration platforms, as well as the public disclosure of protocols and SAPs on trial registration platforms, and the publication of trial results, into the academic integrity assessment of trial sponsors and the journal quality evaluation of those publishing corresponding trials. Alternatively, it can be implemented through administrative pressure at the institutional level. For example, trial transparency can be categorized as excellent, adequate, or inadequate based on the completeness, timeliness, consistency, disclosure, and adherence to standards of trial registration (76), thereby reflecting the academic integrity of trial correspondents. For journals publishing clinical trials, journal evaluation agencies (such as Web of Science, PubMed, and other regional journal assessment bodies) could incorporate the publication of trials that fail to meet these transparency standards into their journal quality assessments. This would motivate journal editors to take concrete action and enforce compliance. Another example demonstrates that administrative pressure at the institutional level has proven effective in ensuring trial result disclosure: In January 2019, the House of Commons Science and Technology Committee issued a letter to United Kingdom universities urging compliance with reporting requirements for clinical trials in medicinal products by June 2019. By June 2021, the proportion of reported trial results increased from 29% to 91%. Five universities achieved 100% reporting compliance, and all 20 universities reported over 70% of required trial results on the European Clinical Trials Register (85).
To address knowledge gaps, enhancing outreach and education on clinical trial transparency is essential. For instance, clearly defining clinical trials and specifying requirements for trial registration and prospective registration should be publicly disseminated across multiple platforms—including trial registration portals, national/regional trial review agency websites, and author and reviewer instructions in journals. Detailed, concrete requirements should be provided rather than vague phrasing such as ‘adhering to WHO best practices’ or ‘International Committee of Medical Journal Editors guidelines’.
To address the time-consuming issue of registration, platforms should consider more user-friendly drop-down designs or developing AI tools to assist registration. For example, first upload the trial protocol and SAP. Then, allow the AI tools equipped on the registration platform to automatically read the files and extract key matching information. The matched content can automatically fill in the corresponding fields within the registration system. Finally, registered users can directly verify the accuracy and make modifications. Alternatively, a one-stop platform integrating trial design and registration could be actively developed. This would enable trial correspondents to input the framework structure provided by the platform during the design phase. Once the trial design is finalized (including the protocol and SAP) and saved for confirmation, these systems could automatically archive the documents. After author final verification, a single click would initiate the registration process, completing the initial registration. There are undoubtedly many more solutions. In short, platforms need to make greater efforts to provide more user-friendly and time-saving registration alternatives.
In this section, we summarize common threats to trial quality, outline existing tools and standards, and then propose a more integrated, stage-based approach to safeguarding quality across the trial life cycle.
Situation overview and existing challenges
The quality of clinical trials is the key to determining whether they can truly stand at the pinnacle of evidence-based medicine. We know that, according to the GRADE evidence quality grading system, while randomized trials are assigned a default high-quality rating, issues such as risk of bias can lead to downgrading of their evidence quality (86). Currently, due to numerous quality and integrity issues in clinical trials, scholars advocate that we must maintain a more cautious and healthy skepticism toward trials (30).
This caution is partly driven by the concerning quality of many current clinical trials, characterized by high risk of bias, avoidable design flaws, statistical errors and inadequate sample sizes/power, with results that are fragile. For example, using the RoB 2.0 tool to assess risk of bias in oral and maxillofacial RCTs revealed that 50% showed high risk of bias, 36% raised some concerns about bias risk, and only 14% were classified as low risk of bias (87). Specifically, a study evaluating 840 RCTs on pre-neoplastic gastric lesions published between 2011 and 2021 found uncertain risks of up to 98.93%, 98.69%, and 100% for allocation concealment, blinding of participants or panelists, and blinding of outcome evaluators, respectively (88). And this has been observed in acupuncture RCTs conducted in Japan since the 1990s: apart from improvements in specific areas like sequence generation, the remaining five domains assessed by the Cochrane RoB tool do not seem to have improved (89). For trial design, the identified issues manifest in multiple dimensions. Avoidable design errors in trials had high rates across various domains—weight-loss surgery RCTs at 48.6% (42), dermal scar RCTs at 48.9% (24), vascular RCTs at 68.4% (90), and gastric cancer RCTs at 77.8% (23 trials) (23); not using overall survival as a trial endpoint was found to be associated with a high rate of proportional hazards violation, with approximately 23.8% of phase III superiority clinical trials demonstrating proportional hazards violation (91); RCTs with sequential primary or secondary endpoints published in leading journals were found to have little assured adequacy in such designs (9); 68.7% of antifungal non-inferiority RCTs up to 9 September 2020 failed to justify the use of non-inferiority designs (11), whereas 12.9% of superiority RCTs published in 2021 in the five medical journals with the highest impact factors should have been designed as non-inferiority trials (92); Adaptive designs, increasingly favored by researchers in recent years, have also been found to have similar design issues, including interim analysis timing and frequency, consideration of outcomes for interim analysis, and unplanned adjustments (93); Insufficient consideration may exist in trial protocols from the very beginning—a cross-sectional appraisal of phase III clinical trial records on ClinicalTrials.gov revealed that 77.7% lacked a complete description of randomization methods (10). For the statistical dimension of trials, issues are also multifaceted. A study that examined the appropriateness of statistical methods in acupuncture RCTs found that as many as 70.7% of trials employed suboptimal statistical methods rather than using intention-to-treat analysis or modified intention-to-treat analysis (8); A study that examined trials using repeated measurements of continuous variables as primary outcomes found that 94% of trials used inconsistent statistical methods for sample size calculation and primary analysis, 25.8% used incorrect formulas when adjusting sample size calculations for loss-to-follow-up, and 49.5% of re-calculated sample sizes were found to be larger than the reported sample sizes (12); Analysis of limitations across 120 RCTs revealed that the most commonly self-reported limitations involved: small sample size (47.5%), duration and follow-up restrictions (33.3%), and inadequate controls (32.5%) (94); About half of phase III clinical trials registered on ClinicalTrials.gov by May 26, 2023 did not reach an 80% power level for sample size calculations (13); Re-calculating the sample sizes for 242 RCTs across 44 Cochrane systematic reviews revealed that approximately 90% of trials either overestimated or underestimated the required sample size (95). The fragility index (FI) represents the minimum number of non-events required to reverse the effect direction toward the intervention or control group, thereby shifting the outcome from statistical significance to non-significance. A larger FI indicates greater robustness and reliability of trial results. For FI, clinical trials have been found to exhibit very low FI in multiple domains: a median FI of 3 in colorectal cancer trials (96), 2 in spinal surgery (with FI often lower than the number of lost to follow-up) (97), 4 in hip arthroscopy RCTs (98), and 4 in COVID-19 trials (with over half have an FI of less than 1% of each sample size) (99). Most paradoxically, we typically assume randomization ensures baseline comparability between treatment and control groups in controlled trials. However, a study reviewing 142 RCTs found that among the 84.5% claiming baseline comparability, 57% failed to report how balance was assessed, and post-hoc calculations revealed that 34.5% of these trials exhibited severe imbalance in at least one baseline variable between groups (100).
Integrity is another area of concern in clinical trials beyond trial quality, characterized by issues such as poor transparency, data fabrication or errors, and high retraction rates due to integrity concerns. While trial transparency has been thoroughly discussed earlier, it bears repeating that transparency itself constitutes a vital component of academic integrity. Researchers who analyzed over 6,000 RCTs up to November 2021 for quality review found various credibility and integrity issues throughout the entire RCT lifecycle, with the most common challenges being ethical and transparency concerns (21). Additionally, an analysis of 209 initial drafts of RCTs submitted to an anesthesia journal revealed fabricated data as the most prevalent cause for concern, occurring in a high incidence of 82% (101). Although data from this one journal may not be representative of other journals, such a high rate of data falsification in initial drafts is deeply alarming. Moreover, instances of fabricated or problematic data persist at a similarly high rate in RCTs that proceed through peer review and are ultimately published. One study evaluated the reasons for retractions of clinical research published in PubMed-indexed journals between 2012 and 2022. Among 242 retracted research articles, 62% were clinical trials. The most common reasons for retraction were data or data analysis errors (38.2%), plagiarism (11.8%), duplicate publication (11.1%), ethical issues (7.3%), and methodological flaws (7%) (19). The VITALITY study analyzed RCTs retracted for any reason on Retraction Watch as of November 5, 2024, finding that 70.8% of retractions were data-related, while 12.9% were labeled as paper mills (20). The retraction of clinical trials serves as a corrective mechanism for problematic studies, yet even when retracted, the negative consequences of flawed trials may not be fully mitigated. The 68 conclusions distorted by problematic trials identified in the VITALITY study have been incorporated into 157 clinical guidelines (20), and one study found that the net effect of retractions due to integrity issues in clinical trials is not zero but negative after fitting the data (102).
Both the quality and integrity issues discussed above indirectly reflect that the current peer review process for clinical trials may be sub-optimal. As we know, the traditional quality control system involving journal editors and invited reviewers is critical. One study analyzed 209 initial submissions of RCTs in the field of anesthesia to journals and found that falsified data were the most common cause for concern, occurring in 82% of cases (101). This fully justifies the importance of editors and peer reviewers, as identifying problematic trials often depends on individual patient-level data, which is frequently difficult to obtain after publication. However, it seems we have not fully utilized this advantage, resulting in a less satisfactory situation. For example, a survey of 1,733 reviewers found that only 34.3% checked trial registration websites, while some respondents expressed a desire for editors to independently verify whether trials were registered and to check for discrepancies between registration details and manuscript content prior to sending manuscripts to peer reviewers (103). A study evaluated peer review reports for parallel RCTs across 62 open-access journals published by BioMed Central. Sampling 26 RCTs yielded 59 review reports, revealing that these comments were short (median length of 276 words, with some even consisting of only one sentence), superficial (rarely addressing conclusions, protocol deviations, or data accessibility), and rarely constructive (only 19%). Furthermore, 96.6% of reviewers failed to mention whether they had reviewed the corresponding trial protocol or registration information (104).
In contrast, a great potential exists for quality review of manuscripts at three distinct stages: prior to submission, during the preprint phase, and after formal publication. Regarding pre-submission review, the establishment of independent central review, separate review and monitoring of trial protocols (whether by institutional centers or sponsor-designated bodies), and the creation of data monitoring committees show clear necessity. A comparison of 13,928 pediatric RCT records on ClinicalTrials.gov during 2008–2021 revealed that trials with data monitoring committees more frequently terminated trials for scientific data-related reasons (105). And third-party data monitoring may be preferable, despite its challenges, as studies have found that in phase II oncology clinical trials, local researchers significantly overestimated overall response rate data compared to paired blinded reviewers (106). The National Cancer Institute requires a scientific review of clinical trial protocols at designated cancer centers, in addition to review by Institutional Review Boards. Analysis of reviews conducted by the Protocol Review and Monitoring Committee at the Harold C. Simmons Cancer Center from January 2009 to June 2013 revealed that the proportion of trials requiring modifications reached 27% for industry-sponsored trials and 54% for investigator-initiated trials (IITs) (54). Similarly, the Bill and Melinda Gates Foundation established a Data Analysis Committee for their funded clinical trials, dedicated to conducting scientific reviews of the trial protocols. A retrospective analysis of Data Analysis Committee scientific review feedback for 52 trial protocols from 2020 to 2022 revealed a total of 1,537 comments (36). The median number of comments per protocol was 28, with the most frequently addressed areas being data collection, outcome measurement and endpoints, endpoint analysis, adjustment analysis, other analyses, sample size and power, design, inclusion/exclusion criteria, randomization, statistical simulation, and intervention information (Figure 3). These align with the most frequently identified issues in problematic trials after publication. Regarding preprint-stage and post-publication peer review, a study analyzed comments from systematic reviews, post-preprint discussions (from PubPeer, medRxiv, Research Square, etc.), and post-publication peer review comments. The analysis revealed that systematic review evaluators identified methodological and reporting issues in 89% of RCTs. Additionally, 15% of trials received comments on at least one preprint server or PubPeer, and post-preprint and post-publication comments identified significant problems in 9% of trials (25). Among these concerns: research design issues accounted for 46%, while others included incomplete reporting (39%), errors (31%), sample size issues (23%), statistical analysis problems (19%), applicability of results (18%), inconsistencies in methods analysis and reporting (16%), spin (14%), ethical issues (12%), and inability to access raw data or protocols (7%) (Figure 4). Similarly, an analysis of 1,037 preprint reviews found that comments on preprint servers were comparable in their content to those reviewed through formal peer review (107). Even in retraction analyses, concerns raised about 150 clinical trials retracted between 2012 and 2022 included 72.61% originating from editors or chief editors, while the remaining 27.39% originated from other sources, including authors, readers, and post-publication peer reviewers (19). Journals such as AME Clinical Trials Review specialize in post-publication commentary and review of clinical trials, publishing critiques of published trials and review articles reflecting clinical trials. We conducted a retrospective analysis of all articles published in the journal from its inaugural issue in October 2023 through the December 2025 issue. After excluding commentaries addressing post-hoc analyses, subgroup analyses, or secondary analyses of trials, and removing review articles, we identified 184 commentaries targeting 161 original trials (https://actr.amegroups.org/issue/archive). These commentaries spanned multiple specialties including lung cancer, gastric cancer, colorectal cancer, esophageal cancer, breast cancer, cardiovascular diseases, hematologic malignancies, and prostate cancer. Among the 161 trials, 69 (42.9%) were identified as having issues that could have been resolved prior to publication by the commenting experts. Specifically, the four dimensions mentioned most frequently among these 69 trials were small sample sizes, lack of confidence in trial design dimensions such as group allocation/blinding design and implementation/center considerations/endpoints, poor generalizability and applicability, and inadequate control of trial bias and confounding (Table 2). Furthermore, we interviewed authors of these commentary manuscripts (https://actr.amegroups.org/post/category/interviews-with-outstanding-authors). Among the 12 experts interviewed, 8 (66%) re-emphasized their concerns regarding trial quality issues. Among these, the interpretation of trial results and the frequent neglect of quality-of-life concerns in trial outcome measures are particularly common. For instance, Dr. Toyoaki Hida, Dr. Takehiro Uemura, and Dr. Jiaxin Niu all raised concerns about result interpretation in trials, including overinterpretation of subgroup analysis results and insufficient attention to long-term follow-up data and long-term safety. Dr. Savvas Lampridis, Dr. Takehiro Uemura, and Dr. Igor Gómez-Randulfe all emphasize that quality of life and patient-reported outcomes are areas frequently overlooked in current trials.
Figure 3 Dimensions of trial issues identified during the Data Analysis Committee’s review of trial protocols before trial initiation. This figure is reused under the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0). Original source: Burford B, Norman T, Dolley S. Scientific review of protocols to enhance informativeness of global health clinical trials. Trials 2025;26:85.
Figure 4 Dimensions of trial issues identified through preprints, post-publication peer review, and systematic review comments. This figure is reused under the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0). Original source: Davidson M, Korfitsen CB, Riveros C, et al. Post-publication peer review and the identification of methodological and reporting issues in COVID-19 trials: a qualitative study. BMJ Evid Based Med 2025;30:233-40. PICO, Population, Intervention, Comparison, Outcome.
Table 2
Dimensions of concern identified in post-publication commentaries on trials published in AME Clinical Trials Review (N=69)
Dimensions of concern
N (%)
Small/insufficient sample size to detect differences
28 (41%)
Group/blinding/center/endpoint/other design concerns (e.g., single-arm without control/non-randomized trial/single center/temporary changes to trial design affecting efficacy/addition of primary endpoints during trial/blinding not implemented)
25 (36%)
Insufficient generalizability and clinical applicability
23 (33%)
Inadequate control of bias and confounding
21 (30%)
Issues with patient selection and lack of a representative population (e.g., unreasonable selection of the control group)
19 (28%)
Limited interpretation of results
16 (23%)
Other concerns (inherent limitations, next steps, cost-effectiveness, etc.)
13 (19%)
Follow-up deficiency
12 (17%)
Problems with statistical analysis
6 (9%)
Inappropriate choice of outcome measure
6 (9%)
Incomplete reporting
6 (9%)
Although, as noted above, the current quality and integrity of clinical trials remain a great concern, we are not entirely without experience. Over the years, we have accumulated considerable lessons and have increasingly prioritized these issues, introducing many requirements and review tools to enhance clinical trial standards (32-34,108-120) (summarized in Table 3). It is evident that the standards or tools we use to evaluate the quality and integrity of clinical trials are no longer our primary concern. The challenge we now face is how to establish a widely accepted, validated standard. As Bordewijk et al. noted, ‘apart from the methods to locate textual plagiarism and image manipulation, all other methods, be it theoretical or empirical, are based on examples, are not standardized, and lack formal validation’ (121). Beyond this, the next challenge we face is how to overcome practical obstacles to ensure these tools are used.
Table 3
Some of the existing requirements and tools for assessing the quality or integrity of clinical trials
Selection and allocation, administration of intervention/exposure, assessment of outcome, participant retention
1. Developed by authoritative bodies and continuously updated2. Possesses significant influence and widespread adoption3. Focused on specific issues with clear criteria and accompanying tutorials4. Focusing solely on risk of bias
1. Developed by authoritative bodies and continuously updated2. Possesses significant influence and widespread adoption3. Focused on specific issues with clear criteria for assessment4. Includes tutorials and standardized scoring sheets5. Focusing solely on risk of bias
Trial valid (clearly focused research question, randomization, all patients accounted for), methodologically sound (blinding, group similarity, same level of care), results (effects reported comprehensively, precision, benefits outweigh the harms and costs), help locally (applied in the context, greater value than existing interventions)
1. Developed by authoritative bodies and continuously updated2. Possesses significant influence and widespread adoption3 Focused on specific issues with clear criteria and accompanying tutorials4. Focusing solely on risk of bias
Governance (retrospective registration, lack of ethical approval), author group (≤3 authors, authors with retracted papers or ≥3 RCTs within 24 months), plausibility of intervention, timeline (<6 months from registration or judging from common sense), dropout rate (zero dropout, same number in each group), baseline (<3 characteristics, perfect balance etc.), outcomes
1. Consensus formed by stakeholders from multiple perspectives2. The tool has undergone pilot test3. Detailed, specific, and comprehensive in scope4. Has been used by scholars to evaluate trial integrity, thereby gaining some influence5. Somewhat subjective6. Certain conditions are overly harsh and prone to misjudging trials as dishonest7. No data regarding its accuracy is available
Inspecting post-publication notices; Inspecting conduct, governance, and transparency; Inspecting text and figures, Inspecting results in the study
1. Consensus formed by stakeholders from multiple perspectives2. The tool has undergone pilot test3. The tool is designed for use by systematic reviewers and guideline developers when evaluating clinical trials after publication. However, if applied during the publication process, many of its items would be inapplicable
Governance (issues related to the initial setup of the research process, overview of problems, and accountability in decision-making), rationality (issues related to whether statements in published reports are reasonable/meaningful), plagiarism (issues related to unjustified copying), reporting (issues related to missing data or methods, inadequate reporting, or improper use of AI software/IT technology), and statistics (issues related to using additional statistical tests to independently verify data in published reports to check accuracy and validity)
1. Summarized systematically and already incorporates issues from INSPECT-SR2. Distinguished into two categories: judging based on objective evidence versus subjective judgment3. Information overload poses implementation challenges
Prospective registration, registration number, ethics approval statement, name of approving committee, informed consent statement, declaration of adherence to CONSORT guidelines, data sharing statement
1. Simplicity of information facilitates implementation2. Journal-level requirements impose certain mandatory pressures3. Many journals have already included these standards in their author instructions, but the submission software or interfaces lack corresponding standards, potentially leading to inconsistent implementation4. Unvalidated standards5. Created solely by editors without consensus across multiple stakeholders
Retraction status, registration, ethics approval, adherence to CONSORT guidelines, consistency of endpoints with registration, and at least 85% of the actual sample size as planned in the registration, etc.
1. Distinguishes between absolute quality standards and other quality standards, facilitating differentiation based on importance2. The 21 criteria are solely intended as trustworthiness standards for determining whether randomized controlled trials should be included in meta-analyses, not as comprehensive quality standards. When applying this tool in other contexts, only some of these criteria may be relevant for reference, as others are inapplicable3. Unvalidated standards4. Created solely by editors without consensus across multiple stakeholders
Prospective registration with registry name/registration number, presence of ethics approval statement and approval committee name/approval number/date, adherence to CONSORT guidelines, primary outcomes consistent with registration, authors with no retraction records, trials involving at least 3 authors, data free from artificial rounding, sample size ≥85% of planned size, submission at least 3 months post-patient follow-up, information on loss to follow-up and occurrence of loss to follow-up, and mention of 5 reasonably relevant baseline characteristics, etc.
1. A robust validation of the 17 quality standards revealed statistically significant differences between retracted and non-retracted manuscripts in 76.5% of the criteria2. Has not yet gained consensus or widespread adoption among a broad range of stakeholders
Nine general requirements, fourteen journal guidelines, seven editorial and peer review items, four communication and complaint procedures, sixteen integrity investigation protocols, nine decision-making and monitoring measures, one critical appraisal guideline, eight systematic reviews of RCTs, and sixteen research recommendations
1. A consensus statement by experts from 18 countries representing diverse stakeholder backgrounds2. The content is overly extensive and may prove difficult to implement3. Many provisions are too broad and lack specificity, remaining at the conceptual level with limited practical applicability
The primary outcome should be controlled against current best-practice standards, with overall survival or empirically validated surrogate endpoints as the preferred choice. Absolute benefit metrics must be provided, and health-related quality of life should be included as a secondary endpoint at minimum. Toxicity responses should be objectively documented. Designs should aim for clinically meaningful differences rather than merely statistical significance. Missing data should be detailed with accompanying sensitivity analyses, etc.
1. Content is concise and specific, facilitating implementation2. Only applicable for phase 3 tumor trials3. Not validated for efficacy
1. The four most distinguishing characteristics of trials identified through exploratory clustering of 456 randomized controlled trials from Cochrane reviews for the first time, rather than through expert consensus2. These four core characteristics are already incorporated into guidelines including CONSORT, facilitating implementation by identifying such key aspects when using guidelines3. Features derived solely from clustering trials within the pain domain and within a single large systematic review may not be broadly applicable to trial reviews in other domains
Importance (providing information for significant scientific, medical, or decision-making purposes), design (methods and evidence related to hypotheses), feasibility (practical plans for recruiting sufficient participants), integrity (faithful execution and analysis of the scientific design), reporting (timely, complete, and accurate reporting)
1. Content is concise yet comprehensive2. Not specific enough3. Merely the opinions of a few experts without a multidimensional consensus among stakeholders4. Not validated for efficacy
Systematically evaluating prior evidence to determine the necessity of conducting the study, ensuring sufficient size and length to yield adequate information, addressing issues of greatest concern to patients, assessing cost-effectiveness, verifying transparency and lack of bias in methods and data analysis, online pre-registration, publication of the protocol before trial initiation, adherence to the protocol if one exists, funding sources, conflicts of interest, and free access to raw data
1. Content is concise yet comprehensive2. Preprint manuscript without a final published record currently available
Blinding methods, intention-to-treat analysis, size to reflect randomization effectiveness, sample size for follow-up loss, examination of randomized controlled trial results, reporting of primary, secondary, and safety outcomes, special considerations (additional advantages and limitations of randomized controlled trials, etc.)
1. Content is concise yet comprehensive2. Merely the opinions of two experts without a multidimensional consensus among stakeholders3. Not validated for efficacy4. Tutorial articles but charge fees, making it difficult for broad dissemination
AI, artificial intelligence; IT, information technology; RCTs, randomized controlled trials.
Key recommendations on the challenges
In response to these challenges, four key recommendations are listed below, and an integrated scheme is visualized in Figure 5.
Quality control for clinical trials demands front-loaded efforts, strengthening pre-submission evaluation. The focus should be on independent review of trial protocols and SAPs by the trial sponsor or a third-party review body, ensuring quality control from study conception. This is because we currently place excessive emphasis on peer review of clinical trials while neglecting peer review of clinical trial protocols. If protocols were mandated to undergo pre-trial peer review, just like the trials themselves, it would significantly enhance trial quality. And, as mentioned earlier, only a small portion of protocols are published—that is, undergo peer review. Many clinical trials either do not upload protocols during registration or have protocols that have not undergone peer review. Considering certain specific circumstances in clinical trials, it may not be necessary to publish all protocols. Instead, mandatory review mechanisms could be added during the registration, funding, or approval stages.
Consider incorporating preprint reviews, post-publication reader comments, post-publication letters, post-publication commentaries, and systematic reviewers’ critiques of trials into the clinical trial review pipeline. Establish an ecosystem that enables linkage and feedback for corrections across all quality control stages of clinical trials. The quality control requirements for clinical trials demand more than individual action, but rather an era requiring structural reform. World Health Assembly resolution WHA75.8 (2022) has called for ‘a strengthened global architecture for a coordinated and high-quality clinical trials’ (122). Notably, studies indicate that the median time interval between preprint release and receiving comments is 10 days (interquartile range 2–65 days) (25), which closely matches typical peer review delays. Before final acceptance, editors could ensure authors have fully addressed feedback from both formal and preprint peer reviews. Of course, such integration can enhance research quality and encourage broader scientific participation to proactively identify abnormalities in data or expose potential research fraud. However, it is often perceived as lacking accountability and, when conducted anonymously without formal discussion, may be labeled as ‘lynching’. Therefore, establishing a central coordination and oversight mechanism is essential to prevent discriminatory criticism and unethical conduct. Additionally, post-publication comments, letters, commentaries, and systematic reviews related to clinical trials often remain scattered and fragmented. These opinions have not been systematically brought to the attention of trial authors or journal editors for further corrections. For instance, PubMed’s practice of linking commentaries to the original articles they critique and labeling them with ‘comment on’ and ‘comment in’ represents a promising approach. Similarly, Clinical Trials Review Database (https://ctrd.amegroups.com/) from AME Publishing Company serves this purpose by linking reviewed trials with their corresponding commentaries. However, these approaches still lack a mechanism for providing feedback that enables the original trial authors and the editors of the journal where the trial was published to be informed and make ongoing corrections. It is necessary to explore how to design feedback templates to streamline communication and revisions between reviewers and authors/original journal editors. Perhaps this could be achieved by testing the integration of such evaluations into digital platforms that facilitate the revision process—meaning that publication is not a one-time event but rather a continuous process of public oversight and ongoing correction.
During the editorial and peer-review quality control process, develop structured review guidelines for clinical trials, including items editors must verify and specific dimensions that peer-review reports must address. For example, establish editorial review requirements for clinical trials by incorporating core dimensions addressed by key tools such as TRACT and INSPECT-SR (32,33,111,112,115) into routine review items. These include verifying trial registration status, checking for significant discrepancies between registries and manuscripts (cross-referencing registry information + original registered protocol + published protocol + article text for thorough verification), checking if the actual sample size is less than 85% of the planned size, and confirming whether endpoints have been altered. This enables effective labor division, reserving more specialized reviews for peer experts. Regarding peer review, for instance, authors could be mandated to report FI when reporting trial results. Key issues frequently identified in Figures 3,4Table 2, along with essential tools like JBI (108), RoB 2.0 (109), are incorporated into mandatory peer review feedback items. These could include whether randomization was genuinely ensured; whether there were significant deviations from the intended intervention; whether sample sizes were too small or power issues existed; whether concerns about bias were present; whether major flaws existed in the design or statistical methods; and whether data were falsified.
For integrity reviews, consider implementing a ‘one-to-all’ review mechanism. Upon identifying one trial with integrity concerns, initiate a systematic review of other trials conducted by the same authors, with the journal editor and the authors’ institutional affiliations playing key roles. For example, a systematic review of all RCTs by a particular researcher, initiated after one of their RCTs raised concerns, revealed integrity issues in 14 RCTs involving 1,405 participants (123).
Figure 5 Proposed collaboration and ecosystem of quality control and integrity inspection in clinical trials across stages. SAP, statistical analysis plan.
Barriers and potential practical strategies
There are many practical barriers to better quality and integrity in clinical trials. Here is a discussion of four key obstacles. First, there are barriers related to inadequate proficiency among those conducting trials and reviewers at various stages, coupled with limited training resources. A study surveyed 120 expert members of the World Stroke Organization across 42 countries regarding their understanding of non-inferiority RCTs. A significant 62% reported limited knowledge of the study design (124). A study involving 260 participants from seven countries—ranging from medical students to professors—asked them to identify discrepancies in data charts within given articles. It found that 95.3% of discrepancies were omitted, with 62% of participants failing to detect any differences. Participants who spent more time on the task noticed more discrepancies, and those with more experience publishing papers also identified more discrepancies (125). Although 50% of participants in this study were medical students and only 31% held senior academic titles, it is important to note that participants were explicitly informed of data errors and asked to identify them. Without such prompts, the detection of discrepancies might be even lower. Additionally, a retrospective analysis of online training materials on peer review identified 42 training opportunities, with only 15% of the 20 open access resources covering clinical trials (126). Second, the barriers include insufficient human resources and limited time among stakeholders involved in various stages of trial quality control and integrity checking. Third, there may be structural institutional barriers to integrating preprint comments, post-publication reviews, and systematic reviews into the peer review pipeline, as well as establishing linkages and feedback correction ecosystem. Fourth, trials in specific specialties or trial types face unique professional challenges. For example, challenges in surgical RCTs involve variations in defining interventions and executing them across centers (127).
In response to these practical obstacles, the following strategies are recommended.
To address issues of insufficient competence and limited training resources, efforts should be intensified to develop more open-source training resources and establish reviewer training mechanisms through journals or professional institutions. Successful examples already exist in this regard, such as the Web of Science’s reviewer training platform Publons Academy and the online open-source training resources provided by various publishers. Of note, training around non-inferiority designs, complex interventions, and risk-of-bias assessment etc. may be prioritized as these are recurring themes in many specialties.
Regarding the limited human resources and time available for reviewing trials, incorporating preprint comments into the review system as suggested above can itself alleviate some of the tension on human resources and time. Additionally, when inviting reviewers, busy senior reviewers could be permitted to cultivate core team members by having younger team members conduct initial reviews, while more experienced and busier senior reviewers (those invited by editors) perform the actual quality control. This approach would increase the pool of future reviewer candidates and address the time constraints faced by senior reviewers. To ensure review quality, incentive and oversight mechanisms could be established, such as requiring mutual signatures on review comments or making review comments open access. This manuscript will later discuss in detail the significant progress made by AI in peer review, which could partially alleviate human resource and time constraints. However, it is essential that both editors and reviewers implement manual checks and oversight when utilizing AI for trial review, to prevent information leaks and incorrect comments.
Regarding structural institutional barriers, consider having authoritative, well-established, trusted, and influential institutions or organizations take the lead in facilitating collaboration. For instance, the International Committee of Medical Journal Editors at the journal level, the Publons platform that already possesses robust reviewer and review comment databases, the PubMed platform provided by the National Institutes of Health, and PubPeer as a non-governmental alternative are all potential desirable leading parties. Crossref, a widely used tool and platform across various journals, has taken a promising first step by incorporating review reports from different stages and contributors into its content types and linking them to the articles under appraisal (https://www.crossref.org/documentation/schema-library/markup-guide-record-types/peer-reviews/).
For specific professional barriers, stakeholders should develop more detailed criteria for operations and evaluations tailored to specific challenges. For instance, in surgical clinical trials, the Surgical Technique Reporting Checklist and Standards can be used to define and report surgical interventions more accurately, reducing variability between centers (128). The American Heart Association’s specific standards for designing, conducting, and analyzing cardiac surgery trials also represent an excellent initiative and model (129).
Reporting and dissemination of clinical trials
Situation overview and existing challenges
Regarding the reporting of clinical trials and their protocols, we have the CONSORT and SPIRIT reporting guidelines (https://www.consort-spirit.org/). Both sets of guidelines have been updated multiple times, with the latest version being the 2025 edition. Moreover, as of November 2025, there are 30 extensions to SPIRIT and CONSORT, covering how to report clinical trials with various study designs, different types of data, and diverse intervention approaches (https://www.consort-spirit.org/extensions).
However, reporting of clinical trials remains unsatisfactory across multiple specialties, trial types, and data sets, with variations observed across different levels of journals and regions. Across different specialties, CONSORT usage or reporting compliance was reported at only 32.11% in periodontal trials (130) and 54.3% in COVID-19 treatments (131)—even when we have the CONSERVE 2021 reporting guidelines (132) specifically tailored to accommodate trial reporting adjustments deemed extenuating under emergency circumstances like COVID-19. Only 51.6% of stroke clinical trials reported trial registration numbers, while 60.7% exhibited selective reporting (133). In sepsis research, as many as 91.6% of intervention trials failed to report outcomes (134). Across different trial designs, non-inferiority trials were found to have significant room for improvement in reporting (135). Even among expansion trials published in high-impact-factor journals, adherence to CONSORT-DEFINE remains unfavorable (136). Similarly, compliance with the corresponding CONSORT extension reporting guidelines among stepped-wedge cluster randomized trials from eight high-impact-factor journals was disappointing. For instance, 35% of trials failed to clearly display the duration of each time period in figures as required, and 30% omitted mention of the stepped-wedge design type in titles (137). Regarding reports on various data, a systematic review analyzing 2,025 RCTs found significant discrepancies between abstracts and full texts—particularly in results and conclusions—which is highly misleading since many readers primarily review abstracts rather than the full text (138). Conference abstracts of clinical trials were also found to score an average of only 17.6 points out of 50 (139), although this data was only for RCT abstracts from the European Orthodontic Society Congress. The reasons for this might be partly attributed to the moderate to low compliance found with the CONSORT-A extension guidelines for clinical trial abstracts (140). Similarly, the CONSORT-HARMS extension guidelines for harms were found to be used in only 25% of applicable trials, with zero studies citing the CONSORT-HARMS 2004/2022 statement (141). Disclosure of conflicts of interest in trials was even worse, with only 34% of trials found to adequately disclose conflicts of interest of funders (142). Across different levels of journals and regions, 497 trials published in NEJM, Lancet, JAMA,and BMJ generally complied with the CONSORT 2010 statement, achieving an average compliance rate of 90%. However, reporting on allocation descriptions, concealment, and implementation of randomization still requires improvement (143), particularly in journals from less developed regions. In a study from Iran, only 43.2% of CONSORT items were reported (144). Moreover, the reporting quality of trial protocols and their adherence to the SPIRIT guidelines are similarly no better. For instance, 75.5% of SPIRIT items were found to be unreported in orthodontic trial protocols (145), while the median number of items compliant with SPIRIT-PRO—an extension guideline for patient-reported outcome trials—was only 7.5 (146).
It is noteworthy to emphasize separately that among the challenges analyzed in numerous articles regarding clinical trial reports, spin reporting is mentioned with high frequency. For example, among pilot surgical trials conducted from January 1, 2011, to December 31, 2021, spin reporting was identified in 81.9% of studies, with similar proportions observed in abstracts (80.6%), results (81.9%), and discussions (80.6%) (16). Spin reporting in trials involves not only omitting statistically non-significant outcomes but also introducing new significant primary outcomes (147). Among 162 RCTs published in the 20 highest-impact-factor anesthesia journals, 40% of statistically non-significant trials exhibited misleading spin reporting in abstract conclusions, with spin descriptions reaching as high as 89% (17). Spin reporting in statistically non-significant RCTs was even higher in plastic surgery trials, reaching 85% (148). Visual abstracts were not immune to this problem either. A study randomly sampled RCTs from 15 high-impact-factor journals and found that 57% of visual abstracts for trials with non-significant primary outcomes exhibited spin reporting (149). Regarding spin reporting terminology for negative trial results, an analysis of over 500,000 RCTs found that the overall prevalence of such phrasing remained stable over the 30-year period from 1990 to 2020. The most common expressions were ‘marginally significant’, ‘all but significant’, ‘a nonsignificant trend’, ‘failed to reach statistical significance’, and ‘a strong trend’ (18). The underlying reason is that the academic community still tends to publish statistically significant trial results. Studies have found that statistically positive trials are more likely to be published than negative ones (14,15,150) and are published more quickly (150), whereas an estimated half of trial results are never published, primarily due to ‘negative results’ (151). This reflects an excessive reliance on and misunderstanding of the 0.05 statistical significance threshold among researchers, clinicians, editors, and reviewers. In fact, the 0.05 P value threshold is highly dependent on sample size, leading to a high probability of false positives or P-hacking in trials (152). Correspondingly, scholars have suggested abandoning the common P value threshold and associated terminology like ’statistical significance’, instead judging the clinical relevance of trial results in context.
Why do reporting issues persist in clinical trials and trial protocols despite the existence of numerous reporting guidelines? At least two key reasons have been identified. One issue is the underuse of reporting guidelines. A study that surveyed over 100 journals found that only 46% of journals mention the use of reporting guidelines when inviting peer reviewers to evaluate their manuscripts (153). This reflects the ambiguous and unclear recommendations for adopting CONSORT guidelines by journals. A study that searched the author instructions of 165 high-impact-factor journals found that only 38% of journals mentioned the CONSORT statement in their author instructions, and only 37% explicitly required its use (154). Furthermore, 63% of journals provided insufficiently clear recommendations—failing to explicitly state whether its use was required—and only 47% of editors responded that they had incorporated the CONSORT reporting guidelines into their editorial processes. Another reason is that a large number of newly released reporting guidelines impose an overwhelming workload on researchers. With many newly published guidelines lacking evidence of their effectiveness, they have garnered limited endorsement from both editors and researchers. As of July 19, 2025, the EQUATOR website (https://www.equator-network.org/) lists 672 published reporting guidelines. Among these, 17% are extensions of existing guidelines, with the most common extensions being for the CONSORT guidelines on clinical trial reporting. However, a study interviewing 150 researchers found that participants perceived using reporting guidelines as burdensome and complicated, while remaining uncertain about the actual benefits of adhering to them (155). Although this study did not specifically target the CONSORT or SPIRIT reporting guidelines, it reflects to some extent the significant imbalance between the workload imposed on researchers by current reporting guidelines and the perceived effectiveness of these guidelines in achieving their intended purpose. Additionally, a study interviewed journal editors, with 60% indicating they would be more inclined to consider adopting reporting guidelines in the future if there were more evidence on their effectiveness, including evidence evaluating the effectiveness of the CONSORT series of expanded reporting guidelines (156).
Issues surrounding clinical trials and their protocol reporting also extend to dissemination towards the public, including inadequate accuracy, information bias, lack of standards for an objective and fair lay summary, and systemic structural deficiencies that hinder public engagement and access to trial results. An analysis of YouTube videos created by specialized doctors, dentists, and medical students found that 27.6% were rated as low quality (157). Although the sample size was small and the data did not specifically relate to clinical trials, it highlights the issue of low-quality information dissemination on social media. As clinical trials have a greater impact on social media compared to other research types (158), they have become increasingly important in public information dissemination. Research has found that among 262 clinical trial results disseminated on social media, trials with positive outcomes yielded higher Altmetric scores, indirectly motivating mass media to bias reporting toward positive results (159). Additionally, while the CONSORT 2025 guidelines require a plain language summary, currently we do not have standardized requirements for preparing such summaries (160). Similarly, the access to trial information for the general public is also difficult on registration platforms. A cross-sectional analysis of disclosed participant information sheets on ClinicalTrials.gov revealed that 22% of trials did not include any mention of disseminating trial results to participants, whereas 41% of trials used only the same brief standardized text (four sentences) to inform participants about the trial (161).
Key recommendations on the challenges
More research should be conducted on the effectiveness of CONSORT and SPIRIT extension reporting guidelines, and this evidence should be widely disseminated to enable researchers to recognize the potential benefits of using these guidelines and to encourage journal editors to truly integrate reporting guidelines into their editorial and peer-review processes.
Introducing more explicit and specific mandatory requirements from journals for the use of CONSORT, SPIRIT, and their series of extension reporting guidelines. As early as 2001, research has confirmed that the publication of CONSORT guidelines correlates with improved quality of RCT reporting (162). Subsequent studies have repeatedly demonstrated that journal policies mandating authors to use reporting guidelines—whether through compulsory language in author instructions or requiring completion of a reporting checklist during manuscript revision—can enhance the quality of research reporting (163,164).
Reducing focus on statistical significance thresholds and encouraging reporting of effect sizes, P values, and 95% confidence intervals, as well as emphasizing the clinical relevance of statistical differences identified in trials.
Developing standardized and more accurate requirements for plain language summaries and figure abstracts of clinical trials, and establishing a structured pathway for public participation and access to accurate trial results.
For example, uploading standardized lay summaries to trial registration platforms to create a user-friendly public portal that better integrates with social media information, which could facilitate more accurate trial information access for patients, their families, journalists, and others (165). Alternatively, proven AI tools might be employed to optimize the accurate dissemination of trial information to the public. Research has developed the Trial Promoter tool to test the accuracy of its generated public dissemination messages for clinical trials. Results showed that during a 10-week test period across Twitter and Facebook, 97.7% of the 525 social media posts generated were accurate (166). Another example is Zannad et al., who proposed a more detailed systematic approach to ensure rapid and accurate dissemination of trial results among the general public. This includes encouraging more journals to offer publication options for plain language summaries and figure abstracts (167).
Barriers and potential practical strategies
The above recommendations may encounter several key practical obstacles. First, continued increases in the number of reporting guidelines persist alongside a lack of evidence evaluating their effectiveness. Second, traditional journals may face pressure to publish clinical trials that fail to meet statistical significance thresholds for reasons of journal profits or impact. Third, more compulsory requirements for CONSORT, SPIRIT, and related extensions—along with their integration into peer review processes—may pose time-related challenges for authors, editors, and reviewers.
In response to these obstacles, the following three practical strategies are recommended.
The EQUATOR Network serves as the centralized collection of reporting guidelines, currently operating in its 1.0 era—the collection phase. The next phase could consider transitioning to the 2.0 era—the evaluation or screening era. Since there are currently sufficient reporting guidelines for clinical trials, what is lacking are good, effective, high-quality reporting guidelines. The EQUATOR Network could consider establishing a dedicated evidence section evaluating the quality and effectiveness of reporting guidelines to motivate guideline developers and evaluation researchers to conduct more evaluative studies.
Consider establishing more journals specifically dedicated to publishing ‘negative’ clinical trials that do not meet statistical significance thresholds. This would foster a more rational academic culture regarding statistical significance thresholds and alleviate concerns among traditional journals about declining impact factors when publishing such results. It must be emphasized that such journals would also require robust methodological standards, including prospective registration, protocol and SAP availability, and adequate sample size. Furthermore, the proposal for establishing these journals is intended to provide a credible platform for publishing well-designed, neutral studies, rather than a repository for rejected manuscripts.
Reasonably using AI tools to detect the completeness of clinical trial and protocol reports to improve efficiency, while allowing researchers, editors, and reviewers to focus more time on information verification.
Emerging trends in clinical trials
Situation overview and existing challenges
Emerging trends in clinical trials are numerous, with three primary areas discussed here: registry-based randomized controlled trials (RRCTs), IITs, and AI. Unlike traditional RCTs, which typically employ strict inclusion criteria, RRCTs support research by capitalizing on registries, thereby reflecting real-world conditions more accurately, enhancing generalizability, and expanding recruitment sources. Compared to RCTs, RRCTs employ significantly broader inclusion criteria and encompass multiple intervention modalities. By embedding randomization within registries, RRCTs combine the advantages of randomization with large-scale registry data, offering benefits such as reduced financial costs, enhanced efficiency, straightforward design, practicality, strong external applicability, data linkage, and addressing the gap where traditional RCTs are primarily funded by pharmaceutical companies (168). Currently, studies in Europe and the United States have demonstrated the success of RRCTs in this regard. However, RRCTs also face significant challenges, including ethical/informed consent issues, patient withdrawal, and regulatory boundaries (169). Moreover, despite increasingly widespread support for RRCTs among patients, clinicians, and research coordinators (170), concerns about data quality issues (e.g., missing data, measurement errors, recording bias, coding errors) have been raised, limiting the full realization of registries’ potential and corresponding advantages (170). Moreover, there exists significant variation in the definition and understanding of RRCTs among trial researchers, and education surrounding this methodology remains inadequate (171). Meanwhile, while doctors and trial coordinators acknowledge the advantages of RRCTs, they perceive them as less exciting than RCTs. RRCTs also entail more burdensome research management requirements and face recruitment challenges posed by commercially sponsored RCTs competing with RRCTs (169).
IITs are clinical trials initiated and conducted by researchers from academia or research institutions. Their emergence primarily aims to address commercially insufficient scientific questions and generate applicable solutions for clinical practice, differing from trials sponsored by pharmaceutical companies that focus on commercial value and product launches. IIT can also mitigate, to some extent, the current situation where businesses hold an absolute advantage in trial numbers, influence independent decision-making by intervention scholars (such as whether to publish trial results), and engage in academic misconduct like ghostwriting. For example, a review of trial publications by Portuguese authors found that industry-sponsored trials primarily focused on neurology, while IITs were more prevalent in gastroenterology and infectious diseases. These trials targeted different populations and pursued distinct objectives. The authors called for enhancing the capacity of national clinical research teams to mobilize the independence and value of trials distinct from commercial industry trials (172). Phase I clinical trials in the United Kingdom, Germany, France, Spain, and Italy were found to have significantly lower proportions of non-profit trials compared to industry-sponsored trials. In Italy, non-profit Phase I trials accounted for less than 20%, while industry-sponsored trials exceeded 80% (173). In Hungary, industry-initiated trials constituted as much as 97% of all trials approved in 2012 (174). Moreover, research indicates that industry sponsors influence trial outcome reporting through multiple ways, including prematurely halting trials and withholding results of discontinued trials, owning and controlling data access, and negotiating clinical trial agreements in multicenter trials where investigators’ publication rights are not fully protected (175). This research system creates a dependency on funding from industry sponsors, which may weaken the ability of researchers and institutions to negotiate terms that fully protect publication rights with these sponsors. Moreover, although industry-sponsored trials generally come with professional medical writing support and are found to have better compliance with CONSORT (176), there are many potential pitfalls involved, including the high risk of ghostwriting. For instance, the author has attended numerous academic conferences sponsored by pharmaceutical companies. At some events, companies directly allocate time to promote their writing services under the title of ‘writing support’. However, discussions with fellow attendees revealed that some companies actually provide direct ghostwriting services, constituting serious academic misconduct. Moreover, the author has reviewed job postings from pharmaceutical companies in China, where positions such as medical writer explicitly involve drafting trial manuscripts—not merely providing support as advertised in meetings. Amsterdam et al. also provided case studies detailing corruption in pharmaceutical industry-funded clinical trials: ‘medical ghostwriting and data misrepresentation’, ‘key opinion leaders conducting drug promotion under the flag of ‘medical education’, and collusion by journal editors failing to uphold scientific and peer-review standards (177). However, IITs also face their own challenges. IITs have been found to exhibit lower quality compared to industry-sponsored trials. For instance, in the National Cancer Institute (NCI)’s scientific review of clinical trial protocols, 27% of industry-funded trials required design modifications post-review, whereas this proportion rose to 54% for IITs (54). Additionally, IITs have been found to lack robust scientific review and monitoring systems compared to trials sponsored by pharmaceutical companies, particularly in less developed regions including India. Significant issues also persist regarding adverse event reporting and participant compensation (178). In this regard, China took a significant step forward in 2024 by enacting management regulations for IITs (https://www.medicalresearch.org.cn/login). These regulations establish the main responsibilities of various institutions, a detailed system for scientific review, ethical review, institutional project initiation and completion, and the uploading and disclosure of research information. They also strengthen classification management, prohibit meaningless duplicate research, and enhance overall research efficiency. Furthermore, they establish a systematic regulatory framework for administrative and technical oversight, featuring quality management, an approval system, and information retention periods extending to over 10 years.
AI represents another promising emerging direction in clinical trials. This field is advancing rapidly, accompanied by a mixed landscape of both pros and cons. This includes AI-intervention trials being found to have poor performance in quality, reporting, and transparency, alongside the immense potential and room for development in using AI to address the numerous issues mentioned earlier in this paper—including assisting peer review. Specifically, as of 2023, over 3,000 AI clinical trials had been registered on ClinicalTrials.gov, with more than half being randomized trials, primarily conducted in HICs (179). As of March 4, 2024, trials involving AI medical devices have been conducted in over 60 countries/regions, with 80% being interventional trials. The United States, China, and Canada rank as the top three in terms of trial volume. The primary areas of application include stroke, cognitive impairment, Alzheimer’s disease, depression, schizophrenia, and anxiety disorders (180). However, the quality of AI intervention clinical trials has been found to be concerning. A study evaluating AI trials in ophthalmology from 2010 to 2022 revealed that these trials all had a moderate risk of bias or raised some concerns (181). Reporting and transparency for AI intervention trials are equally concerning. Such trials were found to have a mere 53% compliance score with CONSORT-AI (181). At the journal level, an evaluation revealed that among the 52 journals publishing 65 AI intervention clinical trials, only 3 explicitly endorsed or mandated CONSORT-AI (182). Moreover, among AI trials systematically retrieved, only 15.8% of trial registration platforms publicly disclosed results—significantly lower than the 37.6% dissemination rate via peer-reviewed articles. In addition, 53.6% of articles were found to exhibit selective reporting, and 75% of trials failed to report adverse events altogether (183). Against these concerns are the immense potential for using AI throughout the entire clinical trial lifecycle. For instance, in enhancing trial efficiency and recruitment, preliminary AI systems built on natural language processing technology have been deployed to automatically match suitable clinical trials based on analysis of patients’ daily records, achieving nearly 90% specificity and nearly 80% accuracy (184). Meanwhile, TrialGPT can reduce screening time for trial patient recruitment by 42.6% (185). For trial information integration and retrieval, Trialstreamer (https://trialstreamer.ieai.robotreviewer.net/) automates the identification and categorization of RCTs by continuously monitoring PubMed and the WHO International Clinical Trials Registry Platform. This effectively addresses the issues of fragmented information across trial registries and missing links between registered trials and published articles (186). As of September 2, 2025, the platform contained 908,993 RCT records. More importantly, it claims daily updates, open-source availability, and free download access. Users can input Population, Intervention, Comparison, Outcome (PICO)-structured clinical queries, with results automatically ranked based on predicted risk of bias—prioritizing larger, higher-quality trials. Regarding risk of bias assessment in trials, RobotReviewer was developed to automatically evaluate the risk of bias in RCTs. Results showed that in evaluating 1,955 RCTs, its agreement rate with manual assessments (the gold standard involving two independent groups and two additional rounds of verification) ranged from 63.07% to 83.32%. Although the agreement rate still needs improvement—primarily in allocation concealment and consistency of outcome assessor blinding—it can be considered to have met the standard for a useful assistant tool (187). Regarding trial integrity reviews, researchers fed GPT-4o the TRACT checklist for evaluating trial trustworthiness, full trial PDFs, trial registration documents, and trial registration URLs. GPT-4o achieved an 84% agreement rate with human evaluators on 16 out of 19 TRACT items. However, its limitations include remaining semi-automated, requiring repeated user prompts, needing individual queries for each TRACT item (as batch-querying all 19 items is ineffective), still lacking access to certain subscription-based databases like Retraction Watch, and necessitating substantial manual verification and data security management (188).
Key recommendations on the challenges
Conducting more educational outreach to raise awareness of RRCTs to increase patient enrollment rates, including providing monetary compensation to enrolled participants (169). AI tools can be used to further boost enrollment rates and shorten recruitment times.
Registration authorities and RRCTs should establish sustainable funding models and develop cross-regional data governance collaboration mechanisms, including systematic data quality management systems (171). For education, prioritization may be considered for consistency and completeness of routine data, consent processes in pragmatic settings, and governance.
Reinforcing support and management for IITs, including preserving scientific independence, scientific review, monitoring, quality control, and managing conflicts of interest.
For AI-intervention trials, adopt the corresponding recommendations and implementation strategies outlined earlier to enhance transparency, quality, integrity, trial reporting, and dissemination.
Detailed regulations should clearly specify where AI is used in the workflow, how systems are validated, and what human oversight is in place. For instance, the use of AI requires promoting and educating on core principles such as enhanced human oversight, safety management, and transparency, as exemplified by the FAIITH principles proposed at ASCO 2024 (https://www.asco.org/news-initiatives/policy-news-analysis/asco-sets-six-guiding-principles-ai-oncology).
The FAIITH principles include:
Fairness and equity (AI developers and users must address bias in AI model design and implementation while ensuring equitable access to AI tools);
Accountability (AI systems must comply with legal regulations and ethical requirements; AI developers bear responsibility for AI system decisions and adherence to legal, regulatory, and ethical standards);
Informed stakeholders (when AI is used for clinical decision-making and care, patients and clinicians must be notified);
Institutional oversight (decision-makers should establish structural compliance policies for AI management, including safeguarding decision-making autonomy and information privacy for clinicians and patients);
Transparency (AI must maintain transparency throughout its entire lifecycle);
Human-centered application (human-to-human interaction remains a fundamental element of healthcare. AI should not eliminate the need for human interaction or serve as a substitute for sensitive interactions).
Barriers and potential practical strategies
Regarding the above suggestions, the most significant practical obstacles seen by the author currently are the use of AI without disclosure or transparency, and the abuse of AI without any real human oversight, verification, or review. For instance, numerous manuscripts that utilize AI without any disclosure by the authors are identified in our daily editorial work. A study surveying 1,600 academics found that over 50% have used AI tools to assist with peer reviewing manuscripts (189). The American Association for Cancer Research announced findings at its 10th International Conference on Peer Review and Scientific Publishing in 2025, revealing that 23% of abstracts and 5% of peer review reports may contain text generated by large language models. However, fewer than 25% of authors complied with the requirement to report AI usage during submission. Additionally, we have observed at work that some reviewers return AI-generated feedback without any modifications, revealing that certain reviewers never even verify the AI-generated comments. Pangram Labs, a company specializing in detecting AI-generated content, conducted an exhaustive analysis of AI usage among reviewers at International Conference on Learning Representations (ICLR) 2026. Among the review comments for 75,800 papers, 21% were entirely AI-generated, 4% were heavily edited by AI, 9% were moderately edited by AI, and 22% were lightly edited by AI, with only 43% written entirely by human reviewers.
In order to address these significant practical obstacles, the following strategic recommendations are proposed.
Developing tools with improved accuracy and detection rates for identifying AI usage. As AI systems learn and evolve, an increasing number of AIs will no longer rely on hard-coded language patterns but rather directly mimic human habits and phrasing. Correspondingly, detection tools must undergo efficient and timely updates and iterations.
Cultivating a batch of specialized professionals who are responsible for managing AI across all stages of clinical trials, specifically tasked with manual oversight, manual verification, and manual review.
Implementing AI usage standards and requirements at the legal level, and accelerating the refinement of legal provisions—including duty determination and penalty schemes—rather than merely relying on current core principles and ethical appeals.
Strengths and limitations
The strength of this review lies in a comprehensive overview of major challenges across the entire clinical trial life cycle, from trial registration to publication and dissemination. In addition, this review goes beyond a summary of existing literature by proposing potential solutions and practical strategies that account for real-world barriers, thereby facilitating real action toward resolving these challenges. Finally, this review may also serve as a teaching resource for journal clubs, methodology courses, and reviewer training.
This review also has its own limitations. First, as it is not a systematic review, there are certainly omissions in the literature, so the challenges identified may also be incomplete. Also, since there are too many components in the whole clinical trial life cycle, the review cannot fully cover each component in its entirety. Second, this review is based on reflective articles on clinical trials. Such articles may also suffer from publication bias, as papers highlighting problems like trial registration issues, quality concerns, or reporting deficiencies may be more likely to be published than those reporting the absence of problems. Consequently, certain issues may be overestimated or described with bias. Finally, although we have provided recommendations and solutions to the best of our ability while considering practical challenges and implementation barriers, it must be acknowledged that some suggestions may still prove difficult to implement or remain idealistic in specific countries or contexts. Even so, we have retained these recommendations. This is because, even if only some of them are adopted to some extent in specific countries or contexts, they still hold value in potentially improving the current situation.
Conclusions
In summary, while the number of clinical trials has surged dramatically, significant unnecessary redundancy and waste persist, compounded by global inequities in trial access. Strengthening oversight of trial quality, transparency, integrity, reporting, and information dissemination is now paramount. Even the rise of emerging fields like RRCTs, IITs, and AI has not yet addressed these issues well and has introduced new challenges. In conclusion, the key recommendations and potential strategies for practical barriers (Figure 6) may facilitate improvements if adopted and implemented. And, even modest, incremental changes along the lines we propose can help reduce waste and improve the informativeness of clinical trials.
Figure 6 Recommendations for major challenges in clinical trials and potential implementation strategies for practical barriers. AI, artificial intelligence.
Acknowledgments
The authors would like to thank Yijie Chen and Fangyuan Jiang for their assistance with copyright checking and table refinement. The authors applied AI tools DeepSeek and DeepL for language polish. The prompt used is ‘please help with English language polishing, ensuring that the original meaning is not altered, academic tone is maintained, and readability is improved’. The authors have reviewed and verified the accuracy of all AI-polished content word by word.
Funding: This research was funded in part through the NIH/NCI Cancer Center Support Grant (No. P30 CA008748).
Conflicts of Interest: Allauthors have completed the ICMJE uniform disclosure form (available at https://actr.amegroups.com/article/view/10.21037/actr-25-132/coif). K.Z. serves as the Editor-in-Chief of AME Clinical Trials Review and full-time staff of AME Publishing Company (the publisher of AME Clinical Trials Review). Y.P., B.S., Y.L., Y.C., and F.Y. are full-time staff of AME Publishing Company and serve as unpaid Associate Editors of AME Clinical Trials Review. S.L. serves as an unpaid Section Editor of AME Clinical Trials Review from August 2025 to July 2027. V.G.S. serves as an unpaid Section Editor of AME Clinical Trials Review from November 2025 to December 2027. C.B.S. serves as an unpaid International Advisory Board member of AME Clinical Trials Review from December 2025 to December 2027. I.N. and K.K.Z. serve as unpaid International Advisory Board members of AME Clinical Trials Review from November 2025 to December 2027. The authors have no other conflicts of interest to declare.
Ethical Statement: The authors are accountable for all aspects of the work in ensuring that questions related to the accuracy or integrity of any part of the work are appropriately investigated and resolved.
Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/.
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doi: 10.21037/actr-25-132 Cite this article as: Zhang K, Lampridis S, Simone CB 2nd, Negoi I, Peng Y, Shang B, Lin Y, Cheng Y, Yang F, Shelat VG, Kalantar-Zadeh K. A literature review and reflection on clinical trials: current challenges, future directions, and potential strategies to overcome practical barriers. AME Clin Trials Rev 2026;4:12.